Collagen Type I Alpha 1

MGI MGI:88467

Expression Profile

  MGI  SwissProt  Affy  Unigene  RefSeq  LocusLink  GeneOntology  

MGI  Top

ID: MGI:88467
Symbol: Col1a1
Name: procollagen, type I, alpha 1

SwissProt  Top

ID: CA11_MOUSE
Accession: P11087, Q60635
Name: COL1A1
Species: Mus musculus
Protein: Collagen alpha 1(I) chain precursor.
Functions: TYPE I COLLAGEN IS A MEMBER OF GROUP I COLLAGEN (FIBRILLAR FORMING COLLAGEN).
ID: Q60785
Accession: Q60785
Name: COL1A1
Species: Mus musculus
Protein: Alpha-1 type I procollagen (Fragment).
ID: Q61367
Accession: Q61367
Name: COL1A1
Species: Mus musculus
Protein: Alpha-1 type I collagen (Fragment).
ID: Q61427
Accession: Q61427
Name: COL1A1
Species: Mus musculus
Protein: Alpha 1 type I collagen (Fragment).
ID: Q63919
Accession: Q63919
Name: COL1A1
Species: Mus musculus
Protein: Type I collagen alpha 1 chain (Fragment).
ID: Q99LL6
Accession: Q99LL6
Name: COL1A1
Species: Mus musculus
Protein: Hypothetical 58.8 kDa protein (Fragment).

Affy  Top

ID: 1423669_at
ID: 94305_at
ID: Msa.117.0_f_at
ID: u08020_f_at

Unigene  Top

ID: Mm.22621
Title: procollagen, type I, alpha 1
Gene: Col1a1
Cytoband: 11 56.0 cM

RefSeq  Top

ID: NM_007742

LocusLink  Top

ID: 12842
Symbol: Col1a1
Name: procollagen, type I, alpha 1

GeneOntology  Top

ID: 0001527
Name: microfibril
ID: 0005201
Name: extracellular matrix structural constituent
ID: 0005578
Name: extracellular matrix
ID: 0005581
Name: collagen
ID: 0005615
Name: extracellular space
ID: 0007155
Name: cell adhesion
ID: 0030020
Name: extracellular matrix structural constituent conferring tensile strength activity

Expression Profile  Top

Gene ID Msa.117.0_f_at u08020_f_at
Quiescence-Term-18
HOPACH Clusters
Quiescence-Term-Post
Quiescence-Term-14
Quiescence-T-P 2fold
Postpartum
non-pregnant avg 10396.16 8631.44
14days avg 15384.29 14187.36
14days fold 1.48 1.64
16days avg 13509.86 11412.7
16days fold 1.3 1.32
16v14 fold -1.14 -1.24
17days avg 12076.75 11209.43
17days fold 1.16 1.3
17v16 fold -1.12 -1.02
18days avg 12061.62 10173.66
18days fold 1.16 1.18
18v14 fold -1.28 -1.39
18v16 fold -1.12 -1.12
18v17 fold -1 -1.1
6hrs avg 7497.78 6555.17
6hrs fold -1.39 -1.32
6v18 fold -1.61 -1.55
24hrs avg 6926.49 5493.34
24hrs fold -1.5 -1.57
24v18 fold -1.74 -1.85
24v6 fold -1.08 -1.19
GenBank U08020 U08020
GenMAPP ID P11087 P11087
Gene_Symbol Col1a1 Col1a1
MapLocation 11 56.0 cM 11 56.0 cM
f-rawp 0.0001 0.0001
f-adjp 0.1354 0.0147
gestation >20p 2 3
post>20p 0 0
gestation<-20p 0 0
post<-20p 2 2
Sum all 4 5
np fold-log 0 0
14d fold-log 0.57 0.72
16d fold-log 0.38 0.4
17d fold-log 0.22 0.38
18d fold-log 0.21 0.24
6hrs fold-log -0.47 -0.4
24hrs fold-log -0.59 -0.65
final cluster 8.10E+15 7.52E+15
main cluster 81000000 75200000
2nd level cluster 81 75
main/medoid order 4243 4152
Mediod no no
total in cluster 99 87
final order 4226 4204
HOPACH Pattern Up Quiescence/Down Postpartum Up Quiescence
Abs-main cluster 14200 14200
Abs final order 467 468
Abs-Pattern NULL NULL
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